Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.97□□□□□ -0.33
Msh4Q99MT2 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.97□□□□□ -0.33
Msh4Q99MT2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Msh4Q99MT2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm11918-201ENSMUST00000121660 179 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Mir7654-201ENSMUST00000185082 70 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm19078-201ENSMUST00000206311 727 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm45384-201ENSMUST00000210451 277 ntBASIC12.96□□□□□ -0.33
Msh4Q99MT2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh4Q99MT2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.96□□□□□ -0.34
Msh4Q99MT2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh4Q99MT2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.95□□□□□ -0.34
Msh4Q99MT2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh4Q99MT2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms