Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm27772-201ENSMUST00000184900 187 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm42550-201ENSMUST00000201553 960 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm45865-201ENSMUST00000211815 945 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm18935-201ENSMUST00000212692 664 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm18753-201ENSMUST00000201000 566 ntBASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scrt1Q99M85 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scrt1Q99M85 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms