Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab28Q99KL7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Rab28Q99KL7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rab28Q99KL7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rab28Q99KL7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rab28Q99KL7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rab28Q99KL7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.83□□□□□ -0.36
Rab28Q99KL7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.83□□□□□ -0.36
Rab28Q99KL7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.83□□□□□ -0.36
Rab28Q99KL7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rab28Q99KL7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Gm5186-201ENSMUST00000218781 920 ntBASIC12.82□□□□□ -0.36
Rab28Q99KL7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.82□□□□□ -0.36
Rab28Q99KL7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.82□□□□□ -0.36
Rab28Q99KL7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab28Q99KL7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Rab28Q99KL7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab28Q99KL7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab28Q99KL7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab28Q99KL7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rab28Q99KL7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab28Q99KL7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab28Q99KL7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab28Q99KL7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms