Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm11222-201ENSMUST00000119005 738 ntBASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm11964-201ENSMUST00000120982 444 ntBASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm12363-201ENSMUST00000122250 668 ntBASIC15.27■□□□□ 0.04
Rfc4Q99J62 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Gm5363-201ENSMUST00000211927 938 ntBASIC15.27■□□□□ 0.04
Rfc4Q99J62 Morn2-202ENSMUST00000227729 656 ntBASIC15.27■□□□□ 0.04
Rfc4Q99J62 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfc4Q99J62 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.27■□□□□ 0.03
Rfc4Q99J62 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.27■□□□□ 0.03
Rfc4Q99J62 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfc4Q99J62 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Gm24548-201ENSMUST00000158650 108 ntBASIC15.26■□□□□ 0.03
Rfc4Q99J62 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.26■□□□□ 0.03
Rfc4Q99J62 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.26■□□□□ 0.03
Rfc4Q99J62 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfc4Q99J62 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfc4Q99J62 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfc4Q99J62 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfc4Q99J62 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfc4Q99J62 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.25■□□□□ 0.03
Rfc4Q99J62 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms