Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Gm11814-201ENSMUST00000119515 929 ntBASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Proscos-202ENSMUST00000178990 666 ntBASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb22Q91XZ8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Gm16202-201ENSMUST00000117532 544 ntBASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Gm8213-201ENSMUST00000118191 441 ntBASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Gm19931-201ENSMUST00000198920 368 ntBASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb22Q91XZ8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb22Q91XZ8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Gm11978-201ENSMUST00000122315 466 ntBASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Gm24196-201ENSMUST00000179161 110 ntBASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Gm8652-201ENSMUST00000181363 964 ntBASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb22Q91XZ8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Gm11803-201ENSMUST00000119966 444 ntBASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms