Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb8Q91XZ2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb8Q91XZ2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Gm16215-201ENSMUST00000161990 637 ntBASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb8Q91XZ2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb8Q91XZ2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb8Q91XZ2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb8Q91XZ2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdhb8Q91XZ2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb8Q91XZ2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb8Q91XZ2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms