Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm6152-201ENSMUST00000151704 340 ntBASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm27682-201ENSMUST00000183930 110 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc5Q91XW9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm4857-201ENSMUST00000192718 785 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm37008-201ENSMUST00000195712 319 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm43118-201ENSMUST00000199149 775 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm42550-201ENSMUST00000201553 960 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc5Q91XW9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms