Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.15□□□□□ -0.14
TraipQ8VIG6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.15□□□□□ -0.14
TraipQ8VIG6 Gm43133-201ENSMUST00000197472 463 ntBASIC14.15□□□□□ -0.14
TraipQ8VIG6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TraipQ8VIG6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm11591-201ENSMUST00000120063 702 ntBASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm37042-201ENSMUST00000193816 581 ntBASIC14.14□□□□□ -0.15
TraipQ8VIG6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm19163-201ENSMUST00000223313 780 ntBASIC14.14□□□□□ -0.15
TraipQ8VIG6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.14□□□□□ -0.15
TraipQ8VIG6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TraipQ8VIG6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm11793-201ENSMUST00000120433 981 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm43179-201ENSMUST00000198797 275 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms