Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Gm18187-201ENSMUST00000196476 984 ntBASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.71□□□□□ -0.21
Rprd1aQ8VDS4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rprd1aQ8VDS4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm5687-201ENSMUST00000118252 640 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rprd1aQ8VDS4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rprd1aQ8VDS4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms