Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm1Q8VC85 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm1Q8VC85 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm15487-201ENSMUST00000122373 465 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm26464-201ENSMUST00000157094 305 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm27989-201ENSMUST00000184721 107 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm29667-201ENSMUST00000190817 490 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm43094-201ENSMUST00000196549 921 ntBASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm1Q8VC85 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm15376-201ENSMUST00000122258 783 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm38144-201ENSMUST00000192790 465 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm5279-201ENSMUST00000199575 745 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm20445-201ENSMUST00000061905 565 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm1Q8VC85 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms