Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Grk6-207ENSMUST00000225925 2769 ntBASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Gm7787-201ENSMUST00000216858 688 ntBASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc9Q8VC31 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Olfr286-202ENSMUST00000205305 969 ntBASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Gm5124-202ENSMUST00000132683 2083 ntBASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc9Q8VC31 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Ccdc9Q8VC31 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Gm27741-201ENSMUST00000185060 237 ntBASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc9Q8VC31 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms