Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Gm5566-201ENSMUST00000116118 459 ntBASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Gm5364-201ENSMUST00000216789 889 ntBASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc58Q8R3Q6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Syt7-205ENSMUST00000224135 1557 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.93□□□□□ -0.5
Ccdc58Q8R3Q6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc58Q8R3Q6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms