Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ushbp1Q8R370 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm12485-201ENSMUST00000119641 291 ntBASIC14.92□□□□□ -0.02
Ushbp1Q8R370 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ushbp1Q8R370 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm17420-201ENSMUST00000164753 153 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm45784-201ENSMUST00000188360 142 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm19078-201ENSMUST00000206311 727 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Gm10478-201ENSMUST00000084451 396 ntBASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ushbp1Q8R370 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Ushbp1Q8R370 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms