Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Gm11978-201ENSMUST00000122315 466 ntBASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Gm37444-201ENSMUST00000193605 439 ntBASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 AC135469.1-201ENSMUST00000225984 772 ntBASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx54Q8K4L0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx54Q8K4L0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Gm22121-201ENSMUST00000175148 54 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Ntng1-201ENSMUST00000051253 327 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx54Q8K4L0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm12058-201ENSMUST00000118614 437 ntBASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm18734-201ENSMUST00000172937 808 ntBASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm8285-201ENSMUST00000208293 759 ntBASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx54Q8K4L0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms