Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.56□□□□□ -0.4
Clrn1Q8K445 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clrn1Q8K445 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.55□□□□□ -0.4
Clrn1Q8K445 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm18018-201ENSMUST00000198273 408 ntBASIC12.55□□□□□ -0.4
Clrn1Q8K445 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.55□□□□□ -0.4
Clrn1Q8K445 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.55□□□□□ -0.4
Clrn1Q8K445 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Clrn1Q8K445 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Gm15678-201ENSMUST00000117573 960 ntBASIC12.54□□□□□ -0.4
Clrn1Q8K445 Gm14928-201ENSMUST00000120198 477 ntBASIC12.54□□□□□ -0.4
Clrn1Q8K445 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Gm15429-201ENSMUST00000151268 798 ntBASIC12.54□□□□□ -0.4
Clrn1Q8K445 Gm23984-201ENSMUST00000157139 203 ntBASIC12.54□□□□□ -0.4
Clrn1Q8K445 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms