Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn1Q8K0T0 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm7063-201ENSMUST00000186840 981 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn1Q8K0T0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Gm42660-201ENSMUST00000197733 947 ntBASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Gm7653-201ENSMUST00000214567 508 ntBASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn1Q8K0T0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Mir874-201ENSMUST00000104769 76 ntBASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms