Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Gm37042-201ENSMUST00000193816 581 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Gm43118-201ENSMUST00000199149 775 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm43133-201ENSMUST00000197472 463 ntBASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm43179-201ENSMUST00000198797 275 ntBASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab11fip3Q8CHD8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.14■□□□□ 0.34
Rab11fip3Q8CHD8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Mir1247-201ENSMUST00000116706 82 ntBASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.14■□□□□ 0.33
Rab11fip3Q8CHD8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Gm11591-201ENSMUST00000120063 702 ntBASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Mir6420-201ENSMUST00000185032 102 ntBASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms