Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
ShfQ8CG80 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.86□□□□□ -0.51
ShfQ8CG80 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ShfQ8CG80 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ShfQ8CG80 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm26464-201ENSMUST00000157094 305 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.85□□□□□ -0.51
ShfQ8CG80 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.85□□□□□ -0.51
ShfQ8CG80 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ShfQ8CG80 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms