Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc87Q8CDL9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Gm4875-201ENSMUST00000118257 786 ntBASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Gm27437-201ENSMUST00000183429 107 ntBASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc87Q8CDL9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm15460-201ENSMUST00000118147 391 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc87Q8CDL9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms