Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lrif1Q8CDD9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lrif1Q8CDD9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.15□□□□□ -0.3
Lrif1Q8CDD9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms