Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm3332-201ENSMUST00000189337 928 ntBASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm39404-201ENSMUST00000216350 313 ntBASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gm5513-201ENSMUST00000072982 1218 ntBASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpn1Q8CCS6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm8199-201ENSMUST00000121323 823 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm6161-201ENSMUST00000121942 1102 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm6153-201ENSMUST00000172004 1058 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm6652-201ENSMUST00000186414 1070 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm9116-201ENSMUST00000192400 1018 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm9645-201ENSMUST00000197131 792 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm43962-201ENSMUST00000203898 190 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm807-202ENSMUST00000224929 408 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pabpn1Q8CCS6 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm14724-201ENSMUST00000118400 537 ntBASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm42511-201ENSMUST00000196160 234 ntBASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm44158-201ENSMUST00000203881 505 ntBASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pabpn1Q8CCS6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Gm26013-201ENSMUST00000104404 119 ntBASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Gm5100-201ENSMUST00000195631 589 ntBASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Lgi3-203ENSMUST00000226548 1001 ntBASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Gm26448-201ENSMUST00000082446 203 ntBASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pabpn1Q8CCS6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms