Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf31Q8CCF0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf31Q8CCF0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf31Q8CCF0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf31Q8CCF0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf31Q8CCF0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm11618-201ENSMUST00000117946 267 ntBASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm37497-201ENSMUST00000195830 798 ntBASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf31Q8CCF0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Gm4271-201ENSMUST00000174444 973 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Gm37922-201ENSMUST00000195596 455 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Gm44069-201ENSMUST00000204898 506 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf31Q8CCF0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Prpf31Q8CCF0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Gm12742-201ENSMUST00000117326 410 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Snora78-201ENSMUST00000158630 128 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Gm37424-201ENSMUST00000191727 561 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Gm43630-201ENSMUST00000201550 776 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf31Q8CCF0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms