Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim9Q8C7M3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.67□□□□□ -0.06
Trim9Q8C7M3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim9Q8C7M3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim9Q8C7M3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim9Q8C7M3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms