Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Mir1894-201ENSMUST00000122802 81 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc60Q8C4J0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc60Q8C4J0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc60Q8C4J0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc60Q8C4J0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc60Q8C4J0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc60Q8C4J0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc60Q8C4J0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Proscos-202ENSMUST00000178990 666 ntBASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Gm8652-201ENSMUST00000181363 964 ntBASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Mir7221-201ENSMUST00000184009 72 ntBASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc60Q8C4J0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms