Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rft1Q8C3B8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rft1Q8C3B8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.9□□□□□ -0.51
Rft1Q8C3B8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm15957-201ENSMUST00000118893 974 ntBASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm9229-201ENSMUST00000222777 126 ntBASIC11.89□□□□□ -0.51
Rft1Q8C3B8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rft1Q8C3B8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gm3436-201ENSMUST00000179930 840 ntBASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rft1Q8C3B8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms