Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp44Q8C2S0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm11814-201ENSMUST00000119515 929 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm8810-201ENSMUST00000172895 754 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.54■□□□□ 0.08
Usp44Q8C2S0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp44Q8C2S0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp44Q8C2S0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.52■□□□□ 0.08
Usp44Q8C2S0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.52■□□□□ 0.08
Usp44Q8C2S0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Gm16372-201ENSMUST00000073088 450 ntBASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp44Q8C2S0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp44Q8C2S0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp44Q8C2S0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.52■□□□□ 0.07
Usp44Q8C2S0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp44Q8C2S0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms