Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Gm16479-201ENSMUST00000121706 932 ntBASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf2Q8BZT2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf2Q8BZT2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Matn2-206ENSMUST00000228570 2798 ntBASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gm25261-201ENSMUST00000157416 134 ntBASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf2Q8BZT2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms