Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm9797-201ENSMUST00000052902 613 ntBASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trerf1Q8BXJ2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Trerf1Q8BXJ2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm2445-201ENSMUST00000182798 989 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trerf1Q8BXJ2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms