Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap1Q8BTW8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm5370-201ENSMUST00000187187 574 ntBASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap1Q8BTW8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm13369-201ENSMUST00000119442 987 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm17420-201ENSMUST00000164753 153 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms