Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm11618-201ENSMUST00000117946 267 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm12203-201ENSMUST00000118235 598 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm12209-201ENSMUST00000120089 596 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm29127-201ENSMUST00000188304 517 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Mir874-201ENSMUST00000104769 76 ntBASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.6□□□□□ -0.23
Nup54Q8BTS4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup54Q8BTS4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Gm29705-201ENSMUST00000212598 474 ntBASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup54Q8BTS4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup54Q8BTS4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms