Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scfd1Q8BRF7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm14723-201ENSMUST00000118686 215 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm17208-201ENSMUST00000168388 535 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm38266-201ENSMUST00000194931 421 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Olfr284-202ENSMUST00000206647 966 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm18935-201ENSMUST00000212692 664 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.13■□□□□ 0.01
Scfd1Q8BRF7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm3890-201ENSMUST00000182416 207 ntBASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scfd1Q8BRF7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Mir874-201ENSMUST00000104769 76 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gm13786-201ENSMUST00000122371 333 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gm29396-201ENSMUST00000185659 716 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gm38158-201ENSMUST00000194617 339 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gm18584-201ENSMUST00000203098 964 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Gm3961-201ENSMUST00000204425 994 ntBASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scfd1Q8BRF7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms