Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rd3Q8BRE0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.08□□□□□ -0.15
Rd3Q8BRE0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Rd3Q8BRE0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Olfr284-202ENSMUST00000206647 966 ntBASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.08□□□□□ -0.16
Rd3Q8BRE0 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rd3Q8BRE0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm12241-201ENSMUST00000118330 726 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm26185-201ENSMUST00000157692 266 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm16379-201ENSMUST00000161469 348 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm29396-201ENSMUST00000185659 716 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm38241-201ENSMUST00000192641 898 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm8762-201ENSMUST00000193486 339 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rd3Q8BRE0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm16479-201ENSMUST00000121706 932 ntBASIC14.06□□□□□ -0.16
Rd3Q8BRE0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rd3Q8BRE0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms