Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf4Q8BQZ5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf4Q8BQZ5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf4Q8BQZ5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm5354-201ENSMUST00000182417 973 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm5745-201ENSMUST00000183748 313 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm6745-201ENSMUST00000199216 526 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm9794-201ENSMUST00000202370 423 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm18905-201ENSMUST00000205454 928 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm5425-201ENSMUST00000214125 459 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm15823-201ENSMUST00000064305 670 ntBASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4Q8BQZ5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm12490-201ENSMUST00000120255 560 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Mir6392-201ENSMUST00000184924 108 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm9908-201ENSMUST00000211534 448 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm7653-201ENSMUST00000214567 508 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm18041-201ENSMUST00000218210 618 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4Q8BQZ5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.9□□□□□ -0.35
Cpsf4Q8BQZ5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms