Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.29□□□□□ -0.12
Nop53Q8BK35 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nop53Q8BK35 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.28□□□□□ -0.12
Nop53Q8BK35 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm5866-201ENSMUST00000177881 973 ntBASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.28□□□□□ -0.12
Nop53Q8BK35 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.28□□□□□ -0.12
Nop53Q8BK35 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nop53Q8BK35 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.27□□□□□ -0.12
Nop53Q8BK35 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nop53Q8BK35 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Mir874-201ENSMUST00000104769 76 ntBASIC14.27□□□□□ -0.13
Nop53Q8BK35 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm15487-201ENSMUST00000122373 465 ntBASIC14.27□□□□□ -0.13
Nop53Q8BK35 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm27838-201ENSMUST00000184829 128 ntBASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nop53Q8BK35 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nop53Q8BK35 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.26□□□□□ -0.13
Nop53Q8BK35 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms