Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm7775-201ENSMUST00000218871 853 ntBASIC12.86□□□□□ -0.35
Rnf38Q8BI21 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf38Q8BI21 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm3436-201ENSMUST00000179930 840 ntBASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm27306-201ENSMUST00000183970 107 ntBASIC12.85□□□□□ -0.35
Rnf38Q8BI21 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms