Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Gm13385-201ENSMUST00000121089 220 ntBASIC15.61■□□□□ 0.09
Samm50Q8BGH2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Gm44719-201ENSMUST00000206404 149 ntBASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Gm19220-201ENSMUST00000222682 803 ntBASIC15.61■□□□□ 0.09
Samm50Q8BGH2 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Samm50Q8BGH2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Gm6912-201ENSMUST00000117218 544 ntBASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Gm14928-201ENSMUST00000120198 477 ntBASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Gm18905-201ENSMUST00000205454 928 ntBASIC15.6■□□□□ 0.09
Samm50Q8BGH2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Samm50Q8BGH2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Gm11424-201ENSMUST00000121929 829 ntBASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Samm50Q8BGH2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Samm50Q8BGH2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Samm50Q8BGH2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Samm50Q8BGH2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Samm50Q8BGH2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms