Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf38bQ80SY5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf38bQ80SY5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm44608-201ENSMUST00000206827 855 ntBASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Cts7-204ENSMUST00000225321 1257 ntBASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Gm5161-201ENSMUST00000075243 853 ntBASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf38bQ80SY5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf38bQ80SY5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Rps4l-202ENSMUST00000204242 789 ntBASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm18935-201ENSMUST00000212692 664 ntBASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm45925-201ENSMUST00000218882 744 ntBASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf38bQ80SY5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Gm15240-201ENSMUST00000118156 720 ntBASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Gm12241-201ENSMUST00000118330 726 ntBASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf38bQ80SY5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms