Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Proscos-202ENSMUST00000178990 666 ntBASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh8Q7TSK3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gm29705-201ENSMUST00000212598 474 ntBASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh8Q7TSK3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms