Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scaf4Q6PFF0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm8410-201ENSMUST00000117225 605 ntBASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm27525-201ENSMUST00000184465 107 ntBASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gm17330-201ENSMUST00000221047 165 ntBASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scaf4Q6PFF0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Gm37444-201ENSMUST00000193605 439 ntBASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scaf4Q6PFF0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scaf4Q6PFF0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms