Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 B9d1os-201ENSMUST00000137010 674 ntBASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.66□□□□□ -0.54
Snrnp40Q6PE01 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Mir5120-201ENSMUST00000175020 78 ntBASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm44967-201ENSMUST00000207047 631 ntBASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm13097-201ENSMUST00000210722 397 ntBASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Snrnp40Q6PE01 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Snrnp40Q6PE01 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm11439-201ENSMUST00000118598 409 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm4909-201ENSMUST00000118749 794 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm14277-201ENSMUST00000121195 360 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms