Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn1Q64347 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn1Q64347 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn1Q64347 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn1Q64347 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Clcn1Q64347 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn1Q64347 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.84■□□□□ 0.29
Clcn1Q64347 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.84■□□□□ 0.29
Clcn1Q64347 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn1Q64347 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn1Q64347 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.84■□□□□ 0.29
Clcn1Q64347 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Clcn1Q64347 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn1Q64347 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.83■□□□□ 0.28
Clcn1Q64347 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.83■□□□□ 0.28
Clcn1Q64347 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.83■□□□□ 0.28
Clcn1Q64347 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.83■□□□□ 0.28
Clcn1Q64347 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Gm16372-201ENSMUST00000073088 450 ntBASIC16.83■□□□□ 0.28
Clcn1Q64347 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.83■□□□□ 0.28
Clcn1Q64347 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Clcn1Q64347 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.83■□□□□ 0.28
Clcn1Q64347 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn1Q64347 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcn1Q64347 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Gm16479-201ENSMUST00000121706 932 ntBASIC16.82■□□□□ 0.28
Clcn1Q64347 Gm12363-201ENSMUST00000122250 668 ntBASIC16.82■□□□□ 0.28
Clcn1Q64347 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.82■□□□□ 0.28
Clcn1Q64347 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.82■□□□□ 0.28
Clcn1Q64347 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Gm44882-201ENSMUST00000205702 802 ntBASIC16.82■□□□□ 0.28
Clcn1Q64347 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Clcn1Q64347 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms