Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Gm29705-201ENSMUST00000212598 474 ntBASIC15.69■□□□□ 0.1
Ctr9Q62018 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.69■□□□□ 0.1
Ctr9Q62018 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.69■□□□□ 0.1
Ctr9Q62018 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.68■□□□□ 0.1
Ctr9Q62018 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.68■□□□□ 0.1
Ctr9Q62018 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctr9Q62018 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctr9Q62018 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.67■□□□□ 0.1
Ctr9Q62018 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ctr9Q62018 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.67■□□□□ 0.1
Ctr9Q62018 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.67■□□□□ 0.1
Ctr9Q62018 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ctr9Q62018 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ctr9Q62018 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ctr9Q62018 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.67■□□□□ 0.1
Ctr9Q62018 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ctr9Q62018 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ctr9Q62018 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.66■□□□□ 0.1
Ctr9Q62018 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Gm13369-201ENSMUST00000119442 987 ntBASIC15.66■□□□□ 0.1
Ctr9Q62018 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.66■□□□□ 0.1
Ctr9Q62018 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ctr9Q62018 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ctr9Q62018 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.66■□□□□ 0.1
Ctr9Q62018 Gm44069-201ENSMUST00000204898 506 ntBASIC15.66■□□□□ 0.1
Ctr9Q62018 Gm40466-201ENSMUST00000212174 422 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms