Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.41□□□□□ -0.26
Six4Q61321 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.41□□□□□ -0.26
Six4Q61321 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Six4Q61321 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Gm10012-201ENSMUST00000078252 192 ntBASIC13.41□□□□□ -0.26
Six4Q61321 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Six4Q61321 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Six4Q61321 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Six4Q61321 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.41□□□□□ -0.26
Six4Q61321 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Six4Q61321 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.4□□□□□ -0.26
Six4Q61321 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.4□□□□□ -0.26
Six4Q61321 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Six4Q61321 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Six4Q61321 Gm8810-201ENSMUST00000172895 754 ntBASIC13.4□□□□□ -0.26
Six4Q61321 Gm27839-201ENSMUST00000184242 106 ntBASIC13.4□□□□□ -0.26
Six4Q61321 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.4□□□□□ -0.26
Six4Q61321 Gm44069-201ENSMUST00000204898 506 ntBASIC13.4□□□□□ -0.26
Six4Q61321 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.4□□□□□ -0.26
Six4Q61321 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Six4Q61321 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Six4Q61321 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Six4Q61321 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Six4Q61321 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Six4Q61321 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Six4Q61321 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Six4Q61321 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Six4Q61321 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Six4Q61321 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Six4Q61321 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.39□□□□□ -0.27
Six4Q61321 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.39□□□□□ -0.27
Six4Q61321 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.39□□□□□ -0.27
Six4Q61321 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.39□□□□□ -0.27
Six4Q61321 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.39□□□□□ -0.27
Six4Q61321 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.39□□□□□ -0.27
Six4Q61321 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.39□□□□□ -0.27
Six4Q61321 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.39□□□□□ -0.27
Six4Q61321 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms