Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Gm12502-201ENSMUST00000120197 444 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Gm14277-201ENSMUST00000121195 360 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Mir5120-201ENSMUST00000175020 78 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Usf1Q61069 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Gm28693-202ENSMUST00000190758 331 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.08□□□□□ -0.48
Usf1Q61069 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.08□□□□□ -0.48
Usf1Q61069 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.08□□□□□ -0.48
Usf1Q61069 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Usf1Q61069 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usf1Q61069 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Usf1Q61069 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.07□□□□□ -0.48
Usf1Q61069 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Usf1Q61069 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.07□□□□□ -0.48
Usf1Q61069 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm11439-201ENSMUST00000118598 409 ntBASIC12.07□□□□□ -0.48
Usf1Q61069 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.07□□□□□ -0.48
Usf1Q61069 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.07□□□□□ -0.48
Usf1Q61069 Gm42997-202ENSMUST00000200321 985 ntBASIC12.07□□□□□ -0.48
Usf1Q61069 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.07□□□□□ -0.48
Usf1Q61069 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Usf1Q61069 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.07□□□□□ -0.48
Usf1Q61069 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.07□□□□□ -0.48
Usf1Q61069 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Usf1Q61069 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.07□□□□□ -0.48
Usf1Q61069 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usf1Q61069 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Usf1Q61069 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.06□□□□□ -0.48
Usf1Q61069 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Usf1Q61069 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.06□□□□□ -0.48
Usf1Q61069 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usf1Q61069 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Usf1Q61069 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usf1Q61069 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms