Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Shroom1Q5SX79 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm27682-201ENSMUST00000183930 110 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm18054-201ENSMUST00000207539 555 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shroom1Q5SX79 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Gm26927-201ENSMUST00000182385 965 ntBASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Gm27572-201ENSMUST00000183702 255 ntBASIC14.13□□□□□ -0.15
Shroom1Q5SX79 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Gm6013-201ENSMUST00000212264 699 ntBASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shroom1Q5SX79 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shroom1Q5SX79 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms