Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm13226-201ENSMUST00000117838 404 ntBASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.94■□□□□ 0.14
Vps54Q5SPW0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm16372-201ENSMUST00000073088 450 ntBASIC15.94■□□□□ 0.14
Vps54Q5SPW0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps54Q5SPW0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Mir1982-201ENSMUST00000157368 74 ntBASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Gm37922-201ENSMUST00000195596 455 ntBASIC15.93■□□□□ 0.14
Vps54Q5SPW0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps54Q5SPW0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm8805-201ENSMUST00000117848 313 ntBASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm4271-201ENSMUST00000174444 973 ntBASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.92■□□□□ 0.14
Vps54Q5SPW0 Gm37497-201ENSMUST00000195830 798 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms