Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm7857-201ENSMUST00000117957 358 ntBASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm13461-201ENSMUST00000120980 662 ntBASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm37986-201ENSMUST00000193285 383 ntBASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ccdc88aQ5SNZ0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm4909-201ENSMUST00000118749 794 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc88aQ5SNZ0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm44069-201ENSMUST00000204898 506 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm11591-201ENSMUST00000120063 702 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc88aQ5SNZ0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Gm19208-201ENSMUST00000213861 912 ntBASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc88aQ5SNZ0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms