Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm18624-201ENSMUST00000220966 658 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm26315-201ENSMUST00000083890 321 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf20Q5DTM8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf20Q5DTM8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gm13689-201ENSMUST00000119360 685 ntBASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Mir7654-201ENSMUST00000185082 70 ntBASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf20Q5DTM8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Mir6392-201ENSMUST00000184924 108 ntBASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms