Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.52□□□□□ -0.88
Cks1brtQ3UNC9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Gm29518-201ENSMUST00000190858 372 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.52□□□□□ -0.89
Cks1brtQ3UNC9 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm8258-201ENSMUST00000055593 1449 ntBASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Olfr129-201ENSMUST00000122318 993 ntBASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm25016-201ENSMUST00000158399 131 ntBASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cks1brtQ3UNC9 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms