Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gm11667-201ENSMUST00000119828 486 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gm5732-201ENSMUST00000182596 1007 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gm7003-201ENSMUST00000195089 312 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Gm7848-201ENSMUST00000210739 718 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 AC159819.2-201ENSMUST00000216151 342 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3b2Q3UJB0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm18893-201ENSMUST00000198416 943 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm9555-201ENSMUST00000200908 583 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Gm22058-201ENSMUST00000083393 310 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3b2Q3UJB0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 AC124457.1-201ENSMUST00000198845 120 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3b2Q3UJB0 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms